Determine Hotspot Containing Genes

Source: R/utility.R

Determine Hotspot Containing Genes

determine_hotspot_genes(annovar_csv_path, hotspot_threshold = 5L)

Arguments

annovar_csv_path

path to 'ANNOVAR' csv output file

hotspot_threshold

to determine hotspot genes, the (integer) threshold for the minimum number of cases with certain mutation in COSMIC (default = 5)

Value

vector of gene symbols of genes containing hotspot mutation(s)